The problem#

Previously, I wrote a script for opening and immediately focusing xfce4-appfinder. But xfce4-appfinder will notice if it's already open and just assume you want to use the existing window. Even if it's on a different desktop. And therefore attempting to focus it will either do nothing or switch to that desktop, neither of which is desirable.

The solution#

The actual solution I settled on is more of a workaround than a solution: having xfce4-appfinder on a different desktop doesn't really make sense, so I just set it to be on all desktops (specified as the non-existent desktop -1), so it would never be on the wrong desktop:

xdotool set_desktop_for_window "$winid" -1

To actually move the window to the current desktop, replace xdotool windowactivate "$winid" with

desktop="$(xdotool get_desktop)"
win_desktop="$(xdotool get_desktop_for_window "$winid")"
if [[ "$desktop" == "$win_desktop" ]]
then
  xdotool windowactivate "$winid"
else
  xdotool set_desktop_for_window "$winid" -1
  xdotool set_desktop_for_window "$winid" "$desktop" \
          windowactivate "$winid"
fi

Although this assumes that you know the $winid of the window you want to move. If you have just the title it works just as well to use

wmctrl -R "Application Finder"

The details#